Detailed information of HOLI00002.G19098 in Hydra oligactis

Genomic Location: HOLI00002:2166904...2168707
NR annotation: MBI3518416.1, ribonuclease Z [Bacteroidota bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q64XI2Ribonuclease Z OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=rnz PE=3 SV=1
Q5LGN7Ribonuclease Z OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=rnz PE=3 SV=1
A6LFA6Ribonuclease Z OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=rnz PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0063706 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18962
all species →		Por_Secre_tailSecretion system C-terminal sorting domainDomainInterproscan
PF12706
all species →		Lactamase_B_2Beta-lactamase superfamily domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036866
all species →		Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR013471
all species →		FamilyRibonuclease Z/BNInterproscan
IPR050094
all species →		FamilyZinc phosphodiesterase ELAC proteinInterproscan
IPR026444
all species →		DomainSecretion system C-terminal sorting domainInterproscan
IPR001279
all species →		DomainMetallo-beta-lactamaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46018
all species →		ZINC PHOSPHODIESTERASE ELAC PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016891
all species →		Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan
GO:0042781
all species →		Molecular Function3'-tRNA processing endoribonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00002.G19098.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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