Genomic Location: HOLI00002:2273839...2275218
NR annotation: MBS1634281.1, OmpA family protein [Bacteroidota bacterium]
Species Hydra oligactis · all data for this species · gene families
| CDS |
| HOLI00002.g19178.t1 |
| Transcript |
| HOLI00002.g19178.t1 |
| Protein |
| HOLI00002.G19178 |
| UniProt accession | Description |
|---|---|
| P22263 | Outer membrane porin F OS=Pseudomonas syringae pv. syringae OX=321 GN=oprF PE=3 SV=1 |
| P37726 | Outer membrane porin F OS=Pseudomonas fluorescens OX=294 GN=oprF PE=1 SV=1 |
| A0A2S4N3N0 | Outer membrane protein A OS=Shigella flexneri OX=623 GN=ompA PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0014204 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00691 all species → | OmpA | OmpA family | Family | Interproscan |
| PF02412 all species → | TSP_3 | Thrombospondin type 3 repeat | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006664 all species → | Domain | Outer membrane protein, bacterial | Interproscan |
| IPR036737 all species → | Homologous_superfamily | OmpA-like domain superfamily | Interproscan |
| IPR006665 all species → | Domain | OmpA-like domain | Interproscan |
| IPR028974 all species → | Homologous_superfamily | TSP type-3 repeat | Interproscan |
| IPR003367 all species → | Repeat | Thrombospondin, type 3-like repeat | Interproscan |
| IPR050330 all species → | Family | Bacterial Outer Membrane Structural/Functional | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30329 all species → | STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0007155 all species → | Biological Process | cell adhesion | Interproscan |
HOLI00002.G19178.
