Detailed information of HOLI00002.G19258 in Hydra oligactis

Genomic Location: HOLI00002:2357765...2358145
NR annotation: MBL7935783.1, glycine cleavage system protein GcvH [Bacteroidia bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6LGR3Glycine cleavage system H protein OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=gcvH PE=3 SV=1
Q11Z42Glycine cleavage system H protein OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=gcvH PE=3 SV=1
A0LXS6Glycine cleavage system H protein OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=gcvH PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004709 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01597
all species →		GCV_HGlycine cleavage H-proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002930
all species →		FamilyGlycine cleavage system H-proteinInterproscan
IPR000089
all species →		DomainBiotin/lipoyl attachmentInterproscan
IPR003016
all species →		Binding_site2-oxo acid dehydrogenase, lipoyl-binding siteInterproscan
IPR011053
all species →		Homologous_superfamilySingle hybrid motifInterproscan
IPR033753
all species →		FamilyGlycine cleavage system H-protein/SimiateInterproscan
IPR017453
all species →		FamilyGlycine cleavage system H-protein, subgroupInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11715
all species →		GLYCINE CLEAVAGE SYSTEM H PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005960
all species →		Cellular Componentglycine cleavage complexInterproscan
GO:0019464
all species →		Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0009249
all species →		Biological Processprotein lipoylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02437gcvH, GCSH; glycine cleavage system H protein-Lipoic acid metabolismko00785deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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