Detailed information of HOLI00002.G19448 in Hydra oligactis

Genomic Location: HOLI00002:2584014...2585051
NR annotation: MCD6020132.1, dihydroorotate dehydrogenase [Bacteroidota bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0M4D0Dihydroorotate dehydrogenase (quinone) OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=pyrD PE=3 SV=1
A6H0L5Dihydroorotate dehydrogenase (quinone) OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=pyrD PE=3 SV=1
A5FHT2Dihydroorotate dehydrogenase (quinone) OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=pyrD PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004636 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01180
all species →		DHO_dhDihydroorotate dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001295
all species →		Conserved_siteDihydroorotate dehydrogenase, conserved siteInterproscan
IPR005719
all species →		FamilyDihydroorotate dehydrogenase, class 2Interproscan
IPR012135
all species →		FamilyDihydroorotate dehydrogenase, class 1/ 2Interproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR050074
all species →		FamilyDihydroorotate dehydrogenaseInterproscan
IPR005720
all species →		DomainDihydroorotate dehydrogenase, catalyticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48109
all species →		DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006207
all species →		Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0016627
all species →		Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0004152
all species →		Molecular Functiondihydroorotate dehydrogenase activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0006222
all species →		Biological ProcessUMP biosynthetic processInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0009220
all species →		Biological Processpyrimidine ribonucleotide biosynthetic processInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00254DHODH, pyrD; dihydroorotate dehydrogenaseEC:1.3.5.2
Pyrimidine metabolismko00240deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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