Detailed information of HOLI00002.G19600 in Hydra oligactis

Genomic Location: HOLI00002:2756864...2758104
NR annotation: MCD6019402.1, branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Bacteroidota bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P19938D-alanine aminotransferase OS=Bacillus sp. (strain YM-1) OX=72579 GN=dat PE=1 SV=2
Q92I26Probable branched-chain-amino-acid aminotransferase OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=ilvE PE=3 SV=1
Q1RIJ2Probable branched-chain-amino-acid aminotransferase OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=ilvE PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0015808 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01063
all species →		Aminotran_4Amino-transferase class IVDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018300
all species →		Conserved_siteAminotransferase, class IV, conserved siteInterproscan
IPR036038
all species →		Homologous_superfamilyAminotransferase-like, PLP-dependent enzymesInterproscan
IPR001544
all species →		FamilyAminotransferase class IVInterproscan
IPR050571
all species →		FamilyClass-IV Pyridoxal-Phosphate-Dependent AminotransferaseInterproscan
IPR043131
all species →		Homologous_superfamilyBranched-chain-amino-acid aminotransferase-like, N-terminalInterproscan
IPR043132
all species →		Homologous_superfamilyBranched-chain-amino-acid aminotransferase-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42743
all species →		AMINO-ACID AMINOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0019752
all species →		Biological Processcarboxylic acid metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00002.G19600.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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