Detailed information of HOLI00002.G20105 in Hydra oligactis

Genomic Location: HOLI00002:3361689...3361994
NR annotation: MBL7937174.1, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Bacteroidia bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q11R87Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=gatC PE=3 SV=1
Q3B606Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C OS=Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530) OX=319225 GN=gatC PE=3 SV=1
B3QL05Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=gatC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0051319 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02686
all species →		GatCGlu-tRNAGln amidotransferase C subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003837
all species →		FamilyGlu-tRNAGln amidotransferase C subunitInterproscan
IPR036113
all species →		Homologous_superfamilyGlu-tRNAGln amidotransferase superfamily, subunit CInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15004
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006450
all species →		Biological Processregulation of translational fidelityInterproscan
GO:0050567
all species →		Molecular Functionglutaminyl-tRNA synthase (glutamine-hydrolyzing) activityInterproscan
GO:0070681
all species →		Biological Processglutaminyl-tRNAGln biosynthesis via transamidationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02435gatC, GATC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit CEC:6.3.5.6
EC:6.3.5.7
Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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