Detailed information of HOLI00002.G20118 in Hydra oligactis

Genomic Location: HOLI00002:3379870...3380931
NR annotation: MBS1635064.1, rod shape-determining protein RodA [Bacteroidota bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O83514Peptidoglycan glycosyltransferase RodA OS=Treponema pallidum (strain Nichols) OX=243276 GN=rodA PE=3 SV=1
P0ABG8Peptidoglycan glycosyltransferase MrdB OS=Escherichia coli O157:H7 OX=83334 GN=mrdB PE=3 SV=1
P0ABG7Peptidoglycan glycosyltransferase MrdB OS=Escherichia coli (strain K12) OX=83333 GN=mrdB PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0017430 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01098
all species →		FTSW_RODA_SPOVECell cycle proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001182
all species →		FamilyProbable peptidoglycan glycosyltransferase FtsW/RodAInterproscan
IPR018365
all species →		Conserved_siteCell cycle, FtsW / RodA / SpoVE, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30474
all species →		CELL CYCLE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0051301
all species →		Biological Processcell divisionInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0008360
all species →		Biological Processregulation of cell shapeInterproscan
GO:0015648
all species →		Molecular Functionlipid-linked peptidoglycan transporter activityInterproscan
GO:0032153
all species →		Cellular Componentcell division siteInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05837rodA, mrdB; rod shape determining protein RodA-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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