Detailed information of HOLI00002.G20140 in Hydra oligactis

Genomic Location: HOLI00002:3416133...3417842
NR annotation: MCD6065956.1, two-component system sensor histidine kinase [Bacteroidota bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q81JL3Sensory transduction protein LytT OS=Bacillus anthracis OX=1392 GN=lytT PE=3 SV=1
P94514Sensory transduction protein LytT OS=Bacillus subtilis (strain 168) OX=224308 GN=lytT PE=3 SV=1
Q814J1Sensory transduction protein LytT OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=lytT PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012536 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04397
all species →		LytTRLytTr DNA-binding domainDomainInterproscan
PF06580
all species →		His_kinaseHistidine kinaseFamilyInterproscan
PF00072
all species →		Response_regResponse regulator receiver domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011006
all species →		Homologous_superfamilyCheY-like superfamilyInterproscan
IPR001789
all species →		DomainSignal transduction response regulator, receiver domainInterproscan
IPR036890
all species →		Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR050640
all species →		FamilyBacterial two-component sensor kinase systemsInterproscan
IPR007492
all species →		DomainLytTR DNA-binding domainInterproscan
IPR010559
all species →		DomainSignal transduction histidine kinase, internal regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34220
all species →		SENSOR HISTIDINE KINASE YPDAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000160
all species →		Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000155
all species →		Molecular Functionphosphorelay sensor kinase activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00002.G20140.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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