Detailed information of HOLI00002.G20155 in Hydra oligactis

Genomic Location: HOLI00002:3442007...3445030
NR annotation: WP_023577742.1, histidine kinase [Flavobacterium limnosediminis]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0AD15Sensor histidine kinase BtsS OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=btsS PE=3 SV=1
P0AD14Sensor histidine kinase BtsS OS=Escherichia coli (strain K12) OX=83333 GN=btsS PE=1 SV=1
P0AD16Sensor histidine kinase BtsS OS=Shigella flexneri OX=623 GN=btsS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012536 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07495
all species →		Y_Y_YY_Y_Y domainDomainInterproscan
PF06580
all species →		His_kinaseHistidine kinaseFamilyInterproscan
PF07494
all species →		Reg_propTwo component regulator propellerRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050640
all species →		FamilyBacterial two-component sensor kinase systemsInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036890
all species →		Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR011123
all species →		DomainTwo component regulator three YInterproscan
IPR010559
all species →		DomainSignal transduction histidine kinase, internal regionInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011110
all species →		RepeatTwo component regulator propellerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34220
all species →		SENSOR HISTIDINE KINASE YPDAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000155
all species →		Molecular Functionphosphorelay sensor kinase activityInterproscan
GO:0000160
all species →		Biological Processphosphorelay signal transduction systemInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00002.G20155.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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