Gene detail

Detailed information of HOLI00002.G20159 in Hydra oligactis

Genomic Location: HOLI00002:3448758...3449894
NR annotation: MBA4241662.1, aminofutalosine synthase MqnE [Sphingobacteriaceae bacterium]
Species Hydra oligactis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SK48	Aminodeoxyfutalosine synthase OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=mqnE PE=1 SV=1
Q8CJT5	Aminodeoxyfutalosine synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=mqnE PE=3 SV=1
Q9XAP2	Cyclic dehypoxanthine futalosine synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=mqnC PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0091540 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04055 all species →	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF19288 all species →	CofH_C	CofH/MqnC C-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006638 all species →	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan
IPR020050 all species →	Family	FO synthase, subunit 2	Interproscan
IPR007197 all species →	Domain	Radical SAM	Interproscan
IPR022432 all species →	Family	Aminodeoxyfutalosine synthase	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR034405 all species →	Family	F420, menaquinone cofactor biosynthesis	Interproscan
IPR045567 all species →	Domain	CofH/MqnC-like, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43076 all species →	FO SYNTHASE (COFH)	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0016765 all species →	Molecular Function	transferase activity, transferring alkyl or aryl (other than methyl) groups	Interproscan
GO:0009234 all species →	Biological Process	menaquinone biosynthetic process	Interproscan
GO:0044689 all species →	Molecular Function	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18285	mqnE; aminodeoxyfutalosine synthase	EC:2.5.1.120	Ubiquinone and other terpenoid-quinone biosynthesis	ko00130	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.