Detailed information of HOLI00002.G20173 in Hydra oligactis

Genomic Location: HOLI00002:3472539...3473141
NR annotation: MBI3518225.1, response regulator transcription factor [Bacteroidota bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1M7A0Transcriptional regulatory protein MctR OS=Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841) OX=216596 GN=mctR PE=3 SV=1
P0C0Z1Response regulator protein VraR OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=vraR PE=3 SV=1
Q2FX09Response regulator protein VraR OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=vraR PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011964 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00072
all species →		Response_regResponse regulator receiver domainDomainInterproscan
PF00196
all species →		GerEBacterial regulatory proteins, luxR familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000792
all species →		DomainTranscription regulator LuxR, C-terminalInterproscan
IPR039420
all species →		FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR001789
all species →		DomainSignal transduction response regulator, receiver domainInterproscan
IPR011006
all species →		Homologous_superfamilyCheY-like superfamilyInterproscan
IPR016032
all species →		Homologous_superfamilySignal transduction response regulator, C-terminal effectorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43214
all species →		TWO-COMPONENT RESPONSE REGULATORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000160
all species →		Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00002.G20173.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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