Detailed information of HOLI00002.G20189 in Hydra oligactis

Genomic Location: HOLI00002:3496860...3497426
NR annotation: MBL7936741.1, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Bacteroidia bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q11VU7Ribosomal RNA small subunit methyltransferase G OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=rsmG PE=3 SV=1
A0LYD2Ribosomal RNA small subunit methyltransferase G OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=rsmG PE=3 SV=1
A5FJ42Ribosomal RNA small subunit methyltransferase G OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=rsmG PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0029794 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02527
all species →		GidBrRNA small subunit methyltransferase GFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR003682
all species →		FamilyrRNA small subunit methyltransferase GInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31760
all species →		S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0008649
all species →		Molecular FunctionrRNA methyltransferase activityInterproscan
GO:0070043
all species →		Molecular FunctionrRNA (guanine-N7-)-methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03501gidB, rsmG; 16S rRNA (guanine527-N7)-methyltransferaseEC:2.1.1.170
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP