Gene detail

Detailed information of HOLI00002.G20844 in Hydra oligactis

Genomic Location: HOLI00002:4285243...4286748
NR annotation: MBK6983528.1, HAMP domain-containing histidine kinase [Bacteroidota bacterium]
Species abbreviation HOLIG · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P10955	Sensor protein FixL OS=Rhizobium meliloti (strain 1021) OX=266834 GN=fixL PE=1 SV=2
P26489	Sensor protein FixL OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=fixL PE=3 SV=1
B1WYT4	Adaptive-response sensory kinase SasA OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=sasA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005253 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02518 all species →	HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR003594 all species →	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR003661 all species →	Domain	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	Interproscan
IPR004358 all species →	Domain	Signal transduction histidine kinase-related protein, C-terminal	Interproscan
IPR005467 all species →	Domain	Histidine kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43065 all species →	SENSOR HISTIDINE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000155 all species →	Molecular Function	phosphorelay sensor kinase activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016310 all species →	Biological Process	phosphorylation	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13532	kinD; two-component system, sporulation sensor kinase D	EC:2.7.13.3	Two-component system	ko02022	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.