Gene detail

Detailed information of HOLI00150.G1918 in Hydra oligactis

Genomic Location: HOLI00150:86520...87865
NR annotation: WP_105262460.1, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC [Rhodoferax sp. TS-BS-61-7]
Species Hydra oligactis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q21V41	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=dut PE=3 SV=1
Q3SFR7	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Thiobacillus denitrificans (strain ATCC 25259 / T1) OX=292415 GN=dut PE=3 SV=1
B2JDY5	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815) OX=391038 GN=dut PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004744 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02441 all species →	Flavoprotein	Flavoprotein	Family	Interproscan
PF04127 all species →	DFP	DNA / pantothenate metabolism flavoprotein	Family	Interproscan
PF00692 all species →	dUTPase	dUTPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035929 all species →	Homologous_superfamily	CoaB-like superfamily	Interproscan
IPR036551 all species →	Homologous_superfamily	Flavin prenyltransferase-like	Interproscan
IPR008181 all species →	Family	Deoxyuridine triphosphate nucleotidohydrolase	Interproscan
IPR005252 all species →	Family	Coenzyme A biosynthesis bifunctional protein CoaBC	Interproscan
IPR033704 all species →	Domain	dUTPase, trimeric	Interproscan
IPR003382 all species →	Domain	Flavoprotein	Interproscan
IPR036157 all species →	Homologous_superfamily	dUTPase-like superfamily	Interproscan
IPR007085 all species →	Domain	DNA/pantothenate metabolism flavoprotein, C-terminal	Interproscan
IPR029054 all species →	Domain	dUTPase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11241 all species →	DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0004170 all species →	Molecular Function	dUTP diphosphatase activity	Interproscan
GO:0006226 all species →	Biological Process	dUMP biosynthetic process	Interproscan
GO:0046081 all species →	Biological Process	dUTP catabolic process	Interproscan
GO:0004632 all species →	Molecular Function	phosphopantothenate--cysteine ligase activity	Interproscan
GO:0004633 all species →	Molecular Function	phosphopantothenoylcysteine decarboxylase activity	Interproscan
GO:0010181 all species →	Molecular Function	FMN binding	Interproscan
GO:0015937 all species →	Biological Process	coenzyme A biosynthetic process	Interproscan
GO:0015941 all species →	Biological Process	pantothenate catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for HOLI00150.G1918.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.