Detailed information of HOLI00150.G1925 in Hydra oligactis

Genomic Location: HOLI00150:92018...92602
NR annotation: WP_105262467.1, 4-hydroxy-tetrahydrodipicolinate synthase [Rhodoferax sp. TS-BS-61-7]
Species abbreviation HOLIG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B9MER64-hydroxy-tetrahydrodipicolinate synthase OS=Acidovorax ebreus (strain TPSY) OX=535289 GN=dapA PE=3 SV=1
A1W4S34-hydroxy-tetrahydrodipicolinate synthase OS=Acidovorax sp. (strain JS42) OX=232721 GN=dapA PE=3 SV=1
Q21WN24-hydroxy-tetrahydrodipicolinate synthase OS=Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=dapA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005376 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00701
all species →
DHDPSDihydrodipicolinate synthetase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013785
all species →
Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR002220
all species →
FamilyDapA-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12128
all species →
DIHYDRODIPICOLINATE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016829
all species →
Molecular Functionlyase activityInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0008840
all species →
Molecular Function4-hydroxy-tetrahydrodipicolinate synthase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00150.G1925.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP