Detailed information of HOLI00150.G1958 in Hydra oligactis

Genomic Location: HOLI00150:136920...138377
NR annotation: WP_105262525.1, sensor domain-containing diguanylate cyclase [Rhodoferax sp. TS-BS-61-7]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P38097Probable diguanylate cyclase DgcE OS=Escherichia coli (strain K12) OX=83333 GN=dgcE PE=2 SV=2
Q73RG3Diguanylate cyclase A OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=dgcA PE=1 SV=1
P24222Uncharacterized protein in hutH 5'region (Fragment) OS=Streptomyces griseus OX=1911 PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0213992 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00990
all species →		GGDEFDiguanylate cyclase, GGDEF domainDomainInterproscan
PF13426
all species →		PAS_9PAS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035965
all species →		Homologous_superfamilyPAS domain superfamilyInterproscan
IPR000160
all species →		DomainGGDEF domainInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR052163
all species →		FamilyDiguanylate Cyclase/Regulatory ProteinInterproscan
IPR000014
all species →		DomainPAS domainInterproscan
IPR029787
all species →		Homologous_superfamilyNucleotide cyclaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46663
all species →		DIGUANYLATE CYCLASE DGCT-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for HOLI00150.G1958. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13069E2.7.7.65; diguanylate cyclaseEC:2.7.7.65
Enzymes with EC numbers-deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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