Detailed information of HOLI00150.G2003 in Hydra oligactis

Genomic Location: HOLI00150:189828...190496
NR annotation: OGO98233.1, MAG: ornithine carbamoyltransferase [Curvibacter sp. GWA2_63_95]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1TLB7Ornithine carbamoyltransferase OS=Paracidovorax citrulli (strain AAC00-1) OX=397945 GN=argF PE=3 SV=1
Q7WKW6Ornithine carbamoyltransferase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=argF PE=3 SV=1
Q7W7H7Ornithine carbamoyltransferase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) OX=257311 GN=argF PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004629 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00185
all species →		OTCaceAspartate/ornithine carbamoyltransferase, Asp/Orn binding domainDomainInterproscan
PF02729
all species →		OTCace_NAspartate/ornithine carbamoyltransferase, carbamoyl-P binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036901
all species →		Homologous_superfamilyAspartate/ornithine carbamoyltransferase superfamilyInterproscan
IPR002292
all species →		FamilyOrnithine/putrescine carbamoyltransferaseInterproscan
IPR006131
all species →		DomainAspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainInterproscan
IPR006132
all species →		DomainAspartate/ornithine carbamoyltransferase, carbamoyl-P bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45753
all species →		ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006520
all species →		Biological Processamino acid metabolic processInterproscan
GO:0016597
all species →		Molecular Functionamino acid bindingInterproscan
GO:0016743
all species →		Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0004585
all species →		Molecular Functionornithine carbamoyltransferase activityInterproscan
GO:0019240
all species →		Biological Processcitrulline biosynthetic processInterproscan
GO:0042450
all species →		Biological Processarginine biosynthetic process via ornithineInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00611OTC, argF, argI; ornithine carbamoyltransferaseEC:2.1.3.3
Arginine biosynthesisko00220deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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