Detailed information of HOLI00299.G46568 in Hydra oligactis

Genomic Location: HOLI00299:105140...106235
NR annotation: TXH95859.1, malate dehydrogenase [Rheinheimera sp.]
Species abbreviation HOLIG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q47VL0Malate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) OX=167879 GN=mdh PE=3 SV=1
A7MNR3Malate dehydrogenase OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=mdh PE=3 SV=1
B1IQP3Malate dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) OX=481805 GN=mdh PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005732 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02866
all species →		Ldh_1_Clactate/malate dehydrogenase, alpha/beta C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022383
all species →		DomainLactate/malate dehydrogenase, C-terminalInterproscan
IPR001252
all species →		Active_siteMalate dehydrogenase, active siteInterproscan
IPR015955
all species →		Homologous_superfamilyLactate dehydrogenase/glycoside hydrolase, family 4, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11540
all species →		MALATE AND LACTATE DEHYDROGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016616
all species →		Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0006108
all species →		Biological Processmalate metabolic processInterproscan
GO:0016615
all species →		Molecular Functionmalate dehydrogenase activityInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0030060
all species →		Molecular FunctionL-malate dehydrogenase (NAD+) activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00299.G46568.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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