Detailed information of HOLI00446.G5259 in Hydra oligactis

Genomic Location: HOLI00446:262459...265498
NR annotation: XP_012557235.2, uncharacterized protein LOC100208319 [Hydra vulgaris]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q708W2Forkhead box protein J1-A OS=Xenopus laevis OX=8355 GN=foxj1-a PE=2 SV=1
Q708W1Forkhead box protein J1-B OS=Xenopus laevis OX=8355 GN=foxj1-b PE=2 SV=1
Q92949Forkhead box protein J1 OS=Homo sapiens OX=9606 GN=FOXJ1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007869 (this species only) · gene tree & orthology
Transcription factor familyFork_head · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00250
all species →		ForkheadForkhead domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001766
all species →		DomainFork head domainInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR018122
all species →		Conserved_siteFork head domain conserved site1Interproscan
IPR030456
all species →		Conserved_siteFork head domain conserved site 2Interproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45881
all species →		CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00446.G5259.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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