Detailed information of HOLI00487.G30438 in Hydra oligactis

Genomic Location: HOLI00487:823...24305
NR annotation: XP_047128681.1, Hermansky-Pudlak syndrome 1 protein isoform X1 [Hydra vulgaris]
Species abbreviation HOLIG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005783 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19038
all species →		Fuz_longin_3Third Longin domain of FUZ, MON1 and HPS1DomainInterproscan
PF19036
all species →		Fuz_longin_1First Longin domain of FUZ, MON1 and HPS1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026053
all species →		FamilyBLOC-3 complex member HPS1Interproscan
IPR043970
all species →		DomainFUZ/MON1/HPS1, third Longin domainInterproscan
IPR043972
all species →		DomainFUZ/MON1/HPS1, first Longin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12761
all species →		HERMANSKY-PUDLAK SYNDROME PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0031085
all species →		Cellular ComponentBLOC-3 complexInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20193HPS1; Hermansky-Pudlak syndrome 1 protein-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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