Detailed information of HOLI00504.G55152 in Hydra oligactis

Genomic Location: HOLI00504:196231...197958
NR annotation: WP_023628786.1, MULTISPECIES: PilN family type IVB pilus formation outer membrane protein [Pseudomonas]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0064087 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00263
all species →		SecretinBacterial type II and III secretion system proteinFamilyInterproscan
PF07655
all species →		Secretin_N_2Secretin N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050810
all species →		FamilyBacterial Secretion System Channel ProteinInterproscan
IPR013359
all species →		FamilyPilus formation type IVB, outer membrane PilNInterproscan
IPR004846
all species →		DomainType II/III secretion system, secretin-like domainInterproscan
IPR011514
all species →		DomainSecretin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30332
all species →		PROBABLE GENERAL SECRETION PATHWAY PROTEIN DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009306
all species →		Biological Processprotein secretionInterproscan
GO:0015627
all species →		Cellular Componenttype II protein secretion system complexInterproscan
GO:0009297
all species →		Biological Processpilus assemblyInterproscan
GO:0019867
all species →		Cellular Componentouter membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00504.G55152.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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