Detailed information of HOLI00522.G16690 in Hydra oligactis

Genomic Location: HOLI00522:46108...47388
NR annotation: WP_208930899.1, methyl-accepting chemotaxis protein [Rheinheimera sp. F8]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q88NI1Methyl-accepting chemotaxis protein McpU OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=mcpU PE=1 SV=1
Q9HW93Methyl-accepting chemotaxis protein PctC OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pctC PE=1 SV=1
Q9HW91Methyl-accepting chemotaxis protein PctB OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pctB PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0063643 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00672
all species →		HAMPHAMP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003660
all species →		DomainHAMP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32089
all species →		METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPBInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03406mcp; methyl-accepting chemotaxis protein-Bacterial motility proteinsko02035deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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