Detailed information of HOLI00522.G16810 in Hydra oligactis

Genomic Location: HOLI00522:145952...147136
NR annotation: WP_031570865.1, pseudouridine synthase [Pararheinheimera texasensis]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003100 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00849
all species →		PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006224
all species →		Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR020103
all species →		Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR050188
all species →		FamilyRluA Pseudouridine SynthaseInterproscan
IPR006145
all species →		DomainPseudouridine synthase, RsuA/RluA-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600
all species →		MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001522
all species →		Biological Processpseudouridine synthesisInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0009451
all species →		Biological ProcessRNA modificationInterproscan
GO:0009982
all species →		Molecular Functionpseudouridine synthase activityInterproscan
GO:0000455
all species →		Biological Processenzyme-directed rRNA pseudouridine synthesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00522.G16810.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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