Detailed information of HOLI00522.G16876 in Hydra oligactis

Genomic Location: HOLI00522:205850...206260
NR annotation: MBU2279111.1, glycine dehydrogenase (aminomethyl-transferring) [Gammaproteobacteria bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3IFW1Glycine dehydrogenase (decarboxylating) OS=Pseudoalteromonas translucida (strain TAC 125) OX=326442 GN=gcvP PE=3 SV=1
A7MR85Glycine dehydrogenase (decarboxylating) OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=gcvP PE=3 SV=1
C5BNY8Glycine dehydrogenase (decarboxylating) OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=gcvP PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002709 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02347
all species →		GDC-PGlycine cleavage system P-proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR049315
all species →		DomainGlycine cleavage system P-protein, N-terminal domainInterproscan
IPR020581
all species →		FamilyGlycine cleavage system P proteinInterproscan
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11773
all species →		GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004375
all species →		Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0005960
all species →		Cellular Componentglycine cleavage complexInterproscan
GO:0006546
all species →		Biological Processglycine catabolic processInterproscan
GO:0016594
all species →		Molecular Functionglycine bindingInterproscan
GO:0019464
all species →		Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00522.G16876.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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