Gene detail

Detailed information of HOLI00522.G16910 in Hydra oligactis

Genomic Location: HOLI00522:243133...243534
NR annotation: ALZ77946.1, A/G-specific adenine glycosylase [Rheinheimera sp. F8]
Species abbreviation HOLIG · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P17802	Adenine DNA glycosylase OS=Escherichia coli (strain K12) OX=83333 GN=mutY PE=1 SV=1
Q05869	Adenine DNA glycosylase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=mutY PE=3 SV=1
P44320	Adenine DNA glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=mutY PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005472 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00730 all species →	HhH-GPD	HhH-GPD superfamily base excision DNA repair protein	Domain	Interproscan
PF00633 all species →	HHH	Helix-hairpin-helix motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003265 all species →	Domain	HhH-GPD domain	Interproscan
IPR011257 all species →	Homologous_superfamily	DNA glycosylase	Interproscan
IPR023170 all species →	Homologous_superfamily	Helix-hairpin-helix, base-excision DNA repair, C-terminal	Interproscan
IPR044298 all species →	Family	Adenine/Thymine-DNA glycosylase	Interproscan
IPR000445 all species →	Conserved_site	Helix-hairpin-helix motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42944 all species →	ADENINE DNA GLYCOSYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0000701 all species →	Molecular Function	purine-specific mismatch base pair DNA N-glycosylase activity	Interproscan
GO:0006298 all species →	Biological Process	mismatch repair	Interproscan
GO:0016798 all species →	Molecular Function	hydrolase activity, acting on glycosyl bonds	Interproscan
GO:0032357 all species →	Molecular Function	oxidized purine DNA binding	Interproscan
GO:0034039 all species →	Molecular Function	8-oxo-7,8-dihydroguanine DNA N-glycosylase activity	Interproscan
GO:0035485 all species →	Molecular Function	adenine/guanine mispair binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for HOLI00522.G16910.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.