Gene detail

Detailed information of HOLI00545.G31435 in Hydra oligactis

Genomic Location: HOLI00545:17692...55837
NR annotation: XP_047133340.1, uncharacterized protein LOC100199166 [Hydra vulgaris]
Species Hydra oligactis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

HOLI00545.g31435.t1

ATGATTAGTAGTAATATTTCAAGTAATTTTATTCATGATCGATTAAGAAATATTCTTCCTGCTCGTAAAAAAAATACTTTAGAAGAAGCATCAAATAAGTTTGAAATTCAGTTTATAGATGGCACTTCTGCTCAAATAGATTTAGCTTTACTAAAATGTTTGTTAAAGCCTAGGGAACTACTTGTTACAGATTTGATCAAAGAAGCTTGCAGATTTCGTAAAATTCATCCTTGTAACACAGTATTTTTTGGGTTAAAAACATACAACAAGTCTGTTCCAAAATGGATTATTCCTACTATAAAAATCCAAACATTAGACAAAAAATTAAAGTATGTTTTACGATTGCAGTTTAAAGTGTTGGATGTTTCCATTTTACGCAAAAATGATGATGTTTACGCATATCAATATTATTTGTTGCAGTGTCGACATGACTTTAAGAACGGCGTTTATGCAAATTTAGTAGAAAGCAAAAACGAAACAGATTTATTAAGGATGGTTATTTTGGAAATGTATATTGTTCATCAAACAACTTCAGTTTCTTTGAAGGATCTTTTAAAAAACAAAAGAAAGGACCTTTTTAACATTGATGGTATCTTGCGTAAATATCCAAACCGAGGTGTTGATAGAGATATCCACAAATGCAAGCAAAAAATTAGTCGATCTTTAGATGGTTTTAAAAGTGTTACAGATCCAGGATATGATTTTATCTATGAAATTGAACAATTAGATCATTATAGAGATGAAGTTTTTTCTATGATGAAGTATGAAGATGGTCATATTGATAAAAGAGAAATTTTGTTAACACCTACCGATATTTATTGCAAGTTTACTACCTCCAATGTTCGATCATGTCTATGGCAATGTTCTTACAGCAACATTTGTGGTGTGAAAGTCCAAGAATATTTTGAAGGAAAAGGAAGAGAAATAAGAATACTCAGAAGAAATGAAAGAGCAGAGATTTTGTTTTGTGAATCCGAAGAAGAATGTGAATCTTTCTTCAGTTTTATGGAAGGTTATTACAGATTGATGGTTAATCAATATGAAACAATACTGTATGATGCTAGCAGCATTCTTAAAGATAACATGGTACATGGACCAATAAGTCAAAAAGTTGCTGAAAACATCATCACAGCTAAAGGGATAGAAGAAGGAAACTACCTTTTCCGCGAGCACTATTCTCAAGACTTTGCCTACTACTATCTAAATGGAATGAAATACCCGTCACTTAACGTGTTGCAAAACAGTTTCAAAGATGCAAAGTTGAAGGATGAATTAGGAGTTGTTCTTAAAAAAAATTATGTACCAAGACAATCAGGAAACATTCCATTTTACATGGAGCCGGGACATCTTCTTAATAATATTGCAAATAGGCTTAAGATGCGAACAATGGATAAAAAAGGTGTATTTGGAGATGTTATGAAGTATATTAAAAAGGATGAAAATAAATCATTGGTTTTAAAACGATTTACTGATATTTCTGCAGAACATGTTAATGTAGTTGCTCAATCTTTAATGTGTTTACATGACCATAAACACATTGTCCAATTTGTTGGACTTTCTTTATTGGACAATGGCTTAATGTTAGCATTTGAGTACTTGGAGTTAGGAAATTTAGAAAGCTATTTACCAAAATTAAGAGACAGTCTAACGTATGGGTTGTTGCTAAAATTTCTTCGTCAGTTGGGTGATGCAGTCATGTTTCTCCATTCAAAGGATTTAGTACATGGTGATTTACAATTAAAAAACATATACTTGTCAGATTTTCAAACTATAAAGCTTTCTGATTCATGTGTTATGTGGAAGTTGTCTGAGGATATTGAAAAGCCTTATGTTAAAAACAACTGCTCGCATTATGCTCCTGAGATTTTCTTAAATGACAAGCCATTATTTACGAAAGAAACTGATATATGGGCATTGGCATTAACGATTTGGCAACTATTTACATTAGAAAAACCATTTAAAACAATGACATATTTCGAGATGAAGAATTTTTTTCACGAGCATTTAAATAAAAAATTCTACTTACGCTTCATCTTTGGCATATATGAATTTAGAATCACCGTGTTACTGTCCAACAAAGTTATGTGA

Transcript

HOLI00545.g31435.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P13185	Serine/threonine protein kinase KIN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KIN1 PE=1 SV=3
Q95ZV7	Discoidin domain-containing receptor tyrosine kinase B OS=Caenorhabditis elegans OX=6239 GN=ddr-2 PE=1 SV=1
Q54I36	Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum OX=44689 GN=pyk3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0015250 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR000299 all species →	Domain	FERM domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR051286 all species →	Family	Janus Kinase (JAK)	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45807 all species →	TYROSINE-PROTEIN KINASE HOPSCOTCH	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for HOLI00545.G31435.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.