Detailed information of HOLI00622.G31300 in Hydra oligactis

Genomic Location: HOLI00622:337292...337876
NR annotation: VEA78299.1, glutaminyl-tRNA synthetase [Salmonella enterica subsp. arizonae]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8EG26Glutamine--tRNA ligase OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=glnS PE=3 SV=1
Q6LTD1Glutamine--tRNA ligase OS=Photobacterium profundum (strain SS9) OX=298386 GN=glnS PE=3 SV=1
Q47Z40Glutamine--tRNA ligase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) OX=167879 GN=glnS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002736 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00749
all species →		tRNA-synt_1ctRNA synthetases class I (E and Q), catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020058
all species →		DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainInterproscan
IPR050132
all species →		FamilyGlutamine/Glutamate--tRNA LigaseInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43097
all species →		GLUTAMINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0043039
all species →		Biological ProcesstRNA aminoacylationInterproscan
GO:0004819
all species →		Molecular Functionglutamine-tRNA ligase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006425
all species →		Biological Processglutaminyl-tRNA aminoacylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI00622.G31300.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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