Detailed information of HOLI00655.G56733 in Hydra oligactis

Genomic Location: HOLI00655:69984...72302
NR annotation: WP_236635170.1, methyl-accepting chemotaxis protein [Rhodoferax sp. TS-BS-61-7]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P21822Methyl-accepting chemotaxis serine transducer OS=Klebsiella aerogenes (strain ATCC 13048 / DSM 30053 / CCUG 1429 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 / CDC 819-56) OX=1028307 GN=tse PE=3 SV=2
P21823Methyl-accepting chemotaxis aspartate transducer OS=Klebsiella aerogenes (strain ATCC 13048 / DSM 30053 / CCUG 1429 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 / CDC 819-56) OX=1028307 GN=tas PE=3 SV=2
P07017Methyl-accepting chemotaxis protein II OS=Escherichia coli (strain K12) OX=83333 GN=tar PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012447 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17200
all species →		sCache_2Single Cache domain 2FamilyInterproscan
PF08376
all species →		NITNitrate and nitrite sensingFamilyInterproscan
PF00015
all species →		MCPsignalMethyl-accepting chemotaxis protein (MCP) signalling domainFamilyInterproscan
PF00672
all species →		HAMPHAMP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033480
all species →		DomainSingle Cache domain 2Interproscan
IPR013587
all species →		DomainNitrate/nitrite sensing proteinInterproscan
IPR004089
all species →		DomainMethyl-accepting chemotaxis protein (MCP) signalling domainInterproscan
IPR003660
all species →		DomainHAMP domainInterproscan
IPR004090
all species →		FamilyChemotaxis methyl-accepting receptorInterproscan
IPR051310
all species →		FamilyMethyl-accepting chemotaxisInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43531
all species →		PROTEIN ICFGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0004888
all species →		Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0006935
all species →		Biological ProcesschemotaxisInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03406mcp; methyl-accepting chemotaxis protein-Bacterial motility proteinsko02035deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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