Detailed information of HOLI01087.G37697 in Hydra oligactis

Genomic Location: HOLI01087:199573...200616
NR annotation: NBO89952.1, acetyl-CoA carboxylase biotin carboxylase subunit [Betaproteobacteria bacterium]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O52058Biotin carboxylase OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=accC PE=3 SV=2
P37798Biotin carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=accC PE=1 SV=1
P24182Biotin carboxylase OS=Escherichia coli (strain K12) OX=83333 GN=accC PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001401 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02786
all species →		CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF02785
all species →		Biotin_carb_CBiotin carboxylase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051602
all species →		FamilyAcetyl-CoA Carboxylase Biotin Carboxylase ComponentInterproscan
IPR011764
all species →		DomainBiotin carboxylation domainInterproscan
IPR005482
all species →		DomainBiotin carboxylase, C-terminalInterproscan
IPR005479
all species →		DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR011054
all species →		Homologous_superfamilyRudiment single hybrid motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48095
all species →		PYRUVATE CARBOXYLASE SUBUNIT AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01087.G37697.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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