Gene detail

Detailed information of HOLI01087.G37745 in Hydra oligactis

Genomic Location: HOLI01087:240428...241612
NR annotation: WP_121421098.1, 4-hydroxybenzoate 3-monooxygenase [Acidovorax sp. 94]
Species Hydra oligactis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q03298	p-hydroxybenzoate hydroxylase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=pobA PE=3 SV=1
P00438	p-hydroxybenzoate hydroxylase OS=Pseudomonas fluorescens OX=294 GN=pobA PE=1 SV=2
P20586	p-hydroxybenzoate hydroxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pobA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0051371 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01494 all species →	FAD_binding_3	FAD binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002938 all species →	Domain	FAD-binding domain	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR012733 all species →	Family	4-hydroxybenzoate 3-monooxygenase	Interproscan
IPR050641 all species →	Family	Rifampicin Monooxygenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43004 all species →	TRK SYSTEM POTASSIUM UPTAKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan
GO:0018659 all species →	Molecular Function	4-hydroxybenzoate 3-monooxygenase activity	Interproscan
GO:0043639 all species →	Biological Process	benzoate catabolic process	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00481	pobA; p-hydroxybenzoate 3-monooxygenase	EC:1.14.13.2	Benzoate degradation	ko00362	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.