Detailed information of HOLI01095.G28581 in Hydra oligactis

Genomic Location: HOLI01095:255756...287659
NR annotation: XP_047146873.1, intraflagellar transport protein 122 homolog [Hydra vulgaris]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8WGF4Intraflagellar transport protein 122 homolog OS=Xenopus tropicalis OX=8364 GN=ift122 PE=2 SV=1
Q6NWV3Intraflagellar transport protein 122 homolog OS=Mus musculus OX=10090 GN=Ift122 PE=1 SV=1
Q6NYH1Intraflagellar transport protein 122 homolog OS=Danio rerio OX=7955 GN=ift122 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002779 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR039857
all species →		FamilyIntraflagellar transport protein 122/121 homologInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12764
all species →		WD REPEAT DOMAIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0030991
all species →		Cellular Componentintraciliary transport particle AInterproscan
GO:0035721
all species →		Biological Processintraciliary retrograde transportInterproscan
GO:0060271
all species →		Biological Processcilium assemblyInterproscan
GO:0061512
all species →		Biological Processprotein localization to ciliumInterproscan
GO:0097730
all species →		Cellular Componentnon-motile ciliumInterproscan
GO:1905515
all species →		Biological Processnon-motile cilium assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01095.G28581.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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