Genomic Location: HOLI01290:119478...129084
NR annotation: XP_047133208.1, nuclear exosome regulator NRDE2 isoform X2 [Hydra vulgaris]
Species abbreviation HOLIG · all data for this species · gene families
| CDS |
| HOLI01290.g5481.t1 |
| Transcript |
| HOLI01290.g5481.t1 |
| Protein |
| HOLI01290.G5481 |
| UniProt accession | Description |
|---|---|
| Q80XC6 | Nuclear exosome regulator NRDE2 OS=Mus musculus OX=10090 GN=Nrde2 PE=1 SV=3 |
| Q9H7Z3 | Nuclear exosome regulator NRDE2 OS=Homo sapiens OX=9606 GN=NRDE2 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005890 (this species only) |
HOLI01290.G5481. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003107 all species → | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013633 all species → | Family | siRNA-mediated silencing protein NRDE-2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13471 all species → | TETRATRICOPEPTIDE-LIKE HELICAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0031048 all species → | Biological Process | regulatory ncRNA-mediated heterochromatin formation | Interproscan |
| GO:0071013 all species → | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| GO:1902369 all species → | Biological Process | negative regulation of RNA catabolic process | Interproscan |
HOLI01290.G5481.
