Detailed information of HOLI01298.G15138 in Hydra oligactis

Genomic Location: HOLI01298:219295...219585
NR annotation: WP_031568531.1, putative pyridoxal-dependent aspartate 1-decarboxylase [Pararheinheimera texasensis]
Species abbreviation HOLIG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5E6F9Aspartate 1-decarboxylase OS=Aliivibrio fischeri (strain ATCC 700601 / ES114) OX=312309 GN=panP PE=1 SV=1
Q43908L-2,4-diaminobutyrate decarboxylase OS=Acinetobacter baumannii OX=470 GN=ddc PE=1 SV=1
A7B1V0Tryptophan decarboxylase OS=Mediterraneibacter gnavus (strain ATCC 29149 / DSM 114966 / JCM 6515 / VPI C7-9) OX=411470 GN=RUMGNA_01526 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005722 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00282
all species →		Pyridoxal_deCPyridoxal-dependent decarboxylase conserved domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR002129
all species →		FamilyPyridoxal phosphate-dependent decarboxylaseInterproscan
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45677
all species →		GLUTAMATE DECARBOXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016830
all species →		Molecular Functioncarbon-carbon lyase activityInterproscan
GO:0019752
all species →		Biological Processcarboxylic acid metabolic processInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016831
all species →		Molecular Functioncarboxy-lyase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01298.G15138.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP