Detailed information of HOLI01351.G30817 in Hydra oligactis

Genomic Location: HOLI01351:143864...199429
NR annotation: XP_047135004.1, Hermansky-Pudlak syndrome 3 protein homolog isoform X1 [Hydra vulgaris]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003974 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14763
all species →		HPS3_CHermansky-Pudlak syndrome 3 protein, C-terminal regionRepeatInterproscan
PF14761
all species →		HPS3_NHermansky-Pudlak syndrome 3 protein, N-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029438
all species →		DomainBLOC-2 complex member HPS3, C-terminal domainInterproscan
IPR017216
all species →		FamilyHermansky-Pudlak syndrome 3 proteinInterproscan
IPR029437
all species →		DomainBLOC-2 complex member HPS3, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR28633
all species →		HERMANSKY-PUDLAK SYNDROME 3 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006996
all species →		Biological Processorganelle organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01351.G30817.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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