Detailed information of HOLI01423.G1573 in Hydra oligactis

Genomic Location: HOLI01423:198445...199350
NR annotation: MBW8465884.1, Do family serine endopeptidase [Acidovorax sp.]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4XSC0Probable periplasmic serine endoprotease DegP-like OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=Pmen_1471 PE=3 SV=1
Q2SL36Probable periplasmic serine endoprotease DegP-like OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=mucD PE=3 SV=1
F6AA62Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas fulva (strain 12-X) OX=743720 GN=Psefu_3239 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002592 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13180
all species →
PDZ_2PDZ domainDomainInterproscan
PF13365
all species →
Trypsin_2Trypsin-like peptidase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →
DomainPDZ domainInterproscan
IPR001940
all species →
FamilyPeptidase S1CInterproscan
IPR036034
all species →
Homologous_superfamilyPDZ superfamilyInterproscan
IPR009003
all species →
Homologous_superfamilyPeptidase S1, PA clanInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22939
all species →
SERINE PROTEASE FAMILY S1C HTRA-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0042597
all species →
Cellular Componentperiplasmic spaceInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0004252
all species →
Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01423.G1573.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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