Detailed information of HOLI01632.G57230 in Hydra oligactis

Genomic Location: HOLI01632:146198...147156
NR annotation: WP_272703251.1, type IV pilus twitching motility protein PilT [Pseudomonas syringae]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P24559Type IV pilus retractation ATPase PilT OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pilT PE=1 SV=1
Q06581Twitching motility protein OS=Neisseria gonorrhoeae OX=485 GN=pilT PE=3 SV=1
P52052Uncharacterized protein YggR OS=Escherichia coli (strain K12) OX=83333 GN=yggR PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0013798 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00437
all species →
T2SSEType II/IV secretion system proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006321
all species →
FamilyPilus retraction protein PilT/PilUInterproscan
IPR001482
all species →
DomainType II/IV secretion system domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050921
all species →
FamilyType IV secretion system ATPasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30486
all species →
TWITCHING MOTILITY PROTEIN PILTInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02669pilT; twitching motility protein PilT-Bacterial motility proteinsko02035deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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