Detailed information of HOLI01677.G55994 in Hydra oligactis

Genomic Location: HOLI01677:59151...60734
NR annotation: XP_002160354.3, E3 ubiquitin-protein ligase RNF103 [Hydra vulgaris]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9R1W3E3 ubiquitin-protein ligase RNF103 OS=Mus musculus OX=10090 GN=Rnf103 PE=2 SV=2
Q9EPZ8E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=10116 GN=Rnf103 PE=2 SV=1
O00237E3 ubiquitin-protein ligase RNF103 OS=Homo sapiens OX=9606 GN=RNF103 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008723 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR042494
all species →
FamilyE3 ubiquitin-protein ligase RNF103Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15302
all species →
E3 UBIQUITIN-PROTEIN LIGASE RNF103Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005783
all species →
Cellular Componentendoplasmic reticulumInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan
GO:0030433
all species →
Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01677.G55994.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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