Detailed information of HOLI01689.G29094 in Hydra oligactis

Genomic Location: HOLI01689:34816...35384
NR annotation: XP_002157779.1, 50S ribosomal protein L16 [Hydra vulgaris]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1IX79Large ribosomal subunit protein uL16 OS=Deinococcus geothermalis (strain DSM 11300 / CIP 105573 / AG-3a) OX=319795 GN=rplP PE=3 SV=1
Q9RXJ5Large ribosomal subunit protein uL16 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) OX=243230 GN=rplP PE=1 SV=3
Q8FS75Large ribosomal subunit protein uL16 OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=rplP PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006636 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00252
all species →		Ribosomal_L16Ribosomal protein L16p/L10eDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016180
all species →		DomainLarge ribosomal subunit protein uL16 domainInterproscan
IPR020798
all species →		Conserved_siteLarge ribosomal subunit protein uL16, conserved siteInterproscan
IPR000114
all species →		FamilyLarge ribosomal subunit protein uL16, bacterial-typeInterproscan
IPR036920
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL16 superfamilyInterproscan
IPR047873
all species →		FamilyLarge ribosomal subunit protein uL16Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12220
all species →		50S/60S RIBOSOMAL PROTEIN L16Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0032543
all species →		Biological Processmitochondrial translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01689.G29094.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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