Gene detail

Detailed information of HOLI01784.G60468 in Hydra oligactis

Genomic Location: HOLI01784:8426...35937
NR annotation: XP_047128174.1, 4-hydroxy-2-oxoglutarate aldolase, mitochondrial [Hydra vulgaris]
Species abbreviation HOLIG · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NY77	4-hydroxy-2-oxoglutarate aldolase, mitochondrial OS=Danio rerio OX=7955 GN=zgc:77082 PE=2 SV=1
Q5XGL6	4-hydroxy-2-oxoglutarate aldolase, mitochondrial OS=Xenopus laevis OX=8355 GN=hoga1 PE=2 SV=1
Q5M8W9	4-hydroxy-2-oxoglutarate aldolase, mitochondrial OS=Xenopus tropicalis OX=8364 GN=hoga1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005376 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00701 all species →	DHDPS	Dihydrodipicolinate synthetase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR002220 all species →	Family	DapA-like	Interproscan
IPR020625 all species →	Active_site	Schiff base-forming aldolase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12128 all species →	DIHYDRODIPICOLINATE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016829 all species →	Molecular Function	lyase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18123	HOGA1; 4-hydroxy-2-oxoglutarate aldolase	EC:4.1.3.16	Arginine and proline metabolism	ko00330	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.