Detailed information of HOLI01928.G28151 in Hydra oligactis

Genomic Location: HOLI01928:47238...48122
NR annotation: WP_031565504.1, (2E,6E)-farnesyl diphosphate synthase [Pararheinheimera texasensis]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P22939Farnesyl diphosphate synthase OS=Escherichia coli (strain K12) OX=83333 GN=ispA PE=1 SV=1
P45204Farnesyl diphosphate synthase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=ispA PE=3 SV=1
Q08291Farnesyl diphosphate synthase OS=Geobacillus stearothermophilus OX=1422 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003928 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00348
all species →
polyprenyl_syntPolyprenyl synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008949
all species →
Homologous_superfamilyIsoprenoid synthase domain superfamilyInterproscan
IPR033749
all species →
Conserved_sitePolyprenyl synthetase, conserved siteInterproscan
IPR000092
all species →
FamilyPolyprenyl synthetaseInterproscan
IPR053378
all species →
FamilyPrenyl diphosphate synthaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43281
all species →
FARNESYL DIPHOSPHATE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008299
all species →
Biological Processisoprenoid biosynthetic processInterproscan
GO:0004659
all species →
Molecular Functionprenyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01928.G28151.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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