Gene detail

Detailed information of HOLI01928.G28201 in Hydra oligactis

Genomic Location: HOLI01928:90164...91231
NR annotation: WP_208931033.1, methionine adenosyltransferase [Rheinheimera sp. F8]
Species Hydra oligactis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1S9A6	S-adenosylmethionine synthase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=metK PE=3 SV=1
A3QAX5	S-adenosylmethionine synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) OX=323850 GN=metK PE=3 SV=1
A0L0K9	S-adenosylmethionine synthase OS=Shewanella sp. (strain ANA-3) OX=94122 GN=metK PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001670 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00438 all species →	S-AdoMet_synt_N	S-adenosylmethionine synthetase, N-terminal domain	Domain	Interproscan
PF02773 all species →	S-AdoMet_synt_C	S-adenosylmethionine synthetase, C-terminal domain	Domain	Interproscan
PF02772 all species →	S-AdoMet_synt_M	S-adenosylmethionine synthetase, central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002133 all species →	Family	S-adenosylmethionine synthetase	Interproscan
IPR022631 all species →	Conserved_site	S-adenosylmethionine synthetase, conserved site	Interproscan
IPR022636 all species →	Homologous_superfamily	S-adenosylmethionine synthetase superfamily	Interproscan
IPR022628 all species →	Domain	S-adenosylmethionine synthetase, N-terminal	Interproscan
IPR022630 all species →	Domain	S-adenosylmethionine synthetase, C-terminal	Interproscan
IPR022629 all species →	Domain	S-adenosylmethionine synthetase, central domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11964 all species →	S-ADENOSYLMETHIONINE SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004478 all species →	Molecular Function	methionine adenosyltransferase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006556 all species →	Biological Process	S-adenosylmethionine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00789	metK, MAT; S-adenosylmethionine synthetase	EC:2.5.1.6	Biosynthesis of various plant secondary metabolites	ko00999	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.