Detailed information of HOLI01937.G38352 in Hydra oligactis

Genomic Location: HOLI01937:182509...182766
NR annotation: TXH96738.1, 23S rRNA pseudouridine(955/2504/2580) synthase RluC [Rheinheimera sp.]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9HZM9Ribosomal large subunit pseudouridine synthase C OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rluC PE=3 SV=1
Q9KQH0Ribosomal large subunit pseudouridine synthase C OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=rluC PE=3 SV=1
Q8ZFU1Ribosomal large subunit pseudouridine synthase C OS=Yersinia pestis OX=632 GN=rluC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003100 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01479
all species →		S4S4 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036986
all species →		Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR002942
all species →		DomainRNA-binding S4 domainInterproscan

 PANTHER
No PANTHER signature was detected for HOLI01937.G38352. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI01937.G38352.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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