Gene detail

Detailed information of HOLI02230.G54517 in Hydra oligactis

Genomic Location: HOLI02230:48372...59499
NR annotation: XP_002166936.3, probable RNA methyltransferase At5g51130 [Hydra vulgaris]
Species Hydra oligactis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7L2J0	7SK snRNA methylphosphate capping enzyme OS=Homo sapiens OX=9606 GN=MEPCE PE=1 SV=1
Q8K3A9	7SK snRNA methylphosphate capping enzyme OS=Mus musculus OX=10090 GN=Mepce PE=1 SV=2
Q9VNH1	U6 snRNA methylphosphate capping enzyme Amus OS=Drosophila melanogaster OX=7227 GN=Amus PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006613 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06859 all species →	Bin3	Bicoid-interacting protein 3 (Bin3)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR024160 all species →	Domain	Bin3-type S-adenosyl-L-methionine binding domain	Interproscan
IPR010675 all species →	Domain	RNA methyltransferase bin3, C-terminal	Interproscan
IPR039772 all species →	Family	RNA methyltransferase Bin3-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12315 all species →	BICOID-INTERACTING PROTEIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0008171 all species →	Molecular Function	O-methyltransferase activity	Interproscan
GO:0008173 all species →	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0017069 all species →	Molecular Function	snRNA binding	Interproscan
GO:0040031 all species →	Biological Process	snRNA modification	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for HOLI02230.G54517.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.