Detailed information of HOLI03211.G33761 in Hydra oligactis

Genomic Location: HOLI03211:47057...88961
NR annotation: XP_012554643.1, E3 ubiquitin-protein ligase BRE1A [Hydra vulgaris]
Species abbreviation HOLIG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9VRP9E3 ubiquitin-protein ligase Bre1 OS=Drosophila melanogaster OX=7227 GN=Bre1 PE=1 SV=2
Q5DTM8E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20 PE=1 SV=2
O75150E3 ubiquitin-protein ligase BRE1B OS=Homo sapiens OX=9606 GN=RNF40 PE=1 SV=5
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005469 (this species only)

 Pfam domain
No Pfam domain signature was detected for HOLI03211.G33761. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR013956
all species →		FamilyE3 ubiquitin ligase Bre1Interproscan
IPR027267
all species →		Homologous_superfamilyAH/BAR domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23163
all species →		RING FINGER PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0033503
all species →		Cellular ComponentHULC complexInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071894
all species →		Biological Processobsolete histone H2B conserved C-terminal lysine ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI03211.G33761.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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