Detailed information of HOLI03250.G1007 in Hydra oligactis

Genomic Location: HOLI03250:17566...19342
NR annotation: WP_066267993.1, methyl-accepting chemotaxis protein [Hydrogenophaga palleronii]
Species Hydra oligactis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P02942Methyl-accepting chemotaxis protein I OS=Escherichia coli (strain K12) OX=83333 GN=tsr PE=1 SV=2
P07018Methyl-accepting chemotaxis protein IV OS=Escherichia coli (strain K12) OX=83333 GN=tap PE=1 SV=2
Q9I6V6Methyl-accepting chemotaxis protein McpB OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=mcpB PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0215556 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00015
all species →		MCPsignalMethyl-accepting chemotaxis protein (MCP) signalling domainFamilyInterproscan
PF02743
all species →		dCache_1Cache domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004089
all species →		DomainMethyl-accepting chemotaxis protein (MCP) signalling domainInterproscan
IPR051310
all species →		FamilyMethyl-accepting chemotaxisInterproscan
IPR004090
all species →		FamilyChemotaxis methyl-accepting receptorInterproscan
IPR033479
all species →		DomainDouble Cache domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43531
all species →		PROTEIN ICFGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0004888
all species →		Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0006935
all species →		Biological ProcesschemotaxisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI03250.G1007.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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