Genomic Location: HOLI05231:35557...36138
NR annotation: WP_009394976.1, MULTISPECIES: heavy metal response regulator transcription factor [Pseudomonas]
Species Hydra oligactis · all data for this species · gene families
| CDS |
| HOLI05231.g39705.t1 |
| Transcript |
| HOLI05231.g39705.t1 |
| Protein |
| HOLI05231.G39705 |
| UniProt accession | Description |
|---|---|
| Q02540 | Transcriptional activator protein CopR OS=Pseudomonas syringae pv. tomato OX=323 GN=copR PE=1 SV=1 |
| Q44006 | Transcriptional activator protein CzcR OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) OX=266264 GN=czcR PE=2 SV=1 |
| I1WSZ4 | Transcriptional activator protein IrlR OS=Burkholderia pseudomallei (strain 1026b) OX=884204 GN=irlR PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004383 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00486 all species → | Trans_reg_C | Transcriptional regulatory protein, C terminal | Domain | Interproscan |
| PF00072 all species → | Response_reg | Response regulator receiver domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011006 all species → | Homologous_superfamily | CheY-like superfamily | Interproscan |
| IPR016032 all species → | Homologous_superfamily | Signal transduction response regulator, C-terminal effector | Interproscan |
| IPR001867 all species → | Domain | OmpR/PhoB-type DNA-binding domain | Interproscan |
| IPR001789 all species → | Domain | Signal transduction response regulator, receiver domain | Interproscan |
| IPR036388 all species → | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR039420 all species → | Family | Transcriptional regulatory protein WalR-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48111 all species → | REGULATOR OF RPOS | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0000160 all species → | Biological Process | phosphorelay signal transduction system | Interproscan |
| GO:0000156 all species → | Molecular Function | phosphorelay response regulator activity | Interproscan |
| GO:0000976 all species → | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0032993 all species → | Cellular Component | protein-DNA complex | Interproscan |
HOLI05231.G39705.
