Detailed information of HOLI05818.G30401 in Hydra oligactis

Genomic Location: HOLI05818:1...32978
NR annotation: XP_047128866.1, DNA topoisomerase I, mitochondrial [Hydra vulgaris]
Species abbreviation HOLIG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P41512DNA topoisomerase 1 OS=Xenopus laevis OX=8355 GN=top1 PE=2 SV=1
P11387DNA topoisomerase 1 OS=Homo sapiens OX=9606 GN=TOP1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005150 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02919
all species →		Topoisom_I_NEukaryotic DNA topoisomerase I, DNA binding fragmentFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051062
all species →		FamilyDNA topoisomerase IBInterproscan
IPR008336
all species →		DomainDNA topoisomerase I, DNA binding, eukaryotic-typeInterproscan
IPR013030
all species →		Homologous_superfamilyDNA topoisomerase I, DNA binding, N-terminal domain 2Interproscan
IPR036202
all species →		Homologous_superfamilyDNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10290
all species →		DNA TOPOISOMERASE IInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003917
all species →		Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0007059
all species →		Biological Processchromosome segregationInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005694
all species →		Cellular ComponentchromosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HOLI05818.G30401.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP