Detailed information of HSymV2.0_g02.02479_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:979655...981031
NR annotation: MBQ4875058.1, PleD family two-component system response regulator [Rickettsiaceae bacterium H1]
Species Hydractinia symbiolongicarpus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9A5I5Response regulator PleD OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=pleD PE=1 SV=1
B8GZM2Response regulator PleD OS=Caulobacter vibrioides (strain NA1000 / CB15N) OX=565050 GN=pleD PE=1 SV=1
Q73RG3Diguanylate cyclase A OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=dgcA PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004383 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00990
all species →		GGDEFDiguanylate cyclase, GGDEF domainDomainInterproscan
PF00072
all species →		Response_regResponse regulator receiver domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011006
all species →		Homologous_superfamilyCheY-like superfamilyInterproscan
IPR001789
all species →		DomainSignal transduction response regulator, receiver domainInterproscan
IPR000160
all species →		DomainGGDEF domainInterproscan
IPR029787
all species →		Homologous_superfamilyNucleotide cyclaseInterproscan
IPR050469
all species →		FamilyBacterial Diguanylate CyclaseInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45138
all species →		REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEMInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000160
all species →		Biological Processphosphorelay signal transduction systemInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0043709
all species →		Biological Processcell adhesion involved in single-species biofilm formationInterproscan
GO:0052621
all species →		Molecular Functiondiguanylate cyclase activityInterproscan
GO:1902201
all species →		Biological Processnegative regulation of bacterial-type flagellum-dependent cell motilityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HSymV2.0_g02.02479_t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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