Hydractinia symbiolongicarpus

Species code HSYMB · Class Hydrozoa · NCBI Taxonomy 13093
9 of 15 data types available See this row in the coverage matrix →

Data available for this species

Genome assembly

✓ available

Assembled genome (size, level, N50, BUSCO)

Gene annotation

✓ available

Predicted gene models with CDS / transcript / protein sequences

Functional annotation

✓ available

InterPro, Pfam, PANTHER, GO and KEGG assignments

Gene family (orthogroup)

✓ available

OrthoFinder orthogroups and TF / ubiquitin families

Bulk transcriptome

✓ 1 record

RNA-seq samples with expression values (TPM)

Co-expression network

✓ 2 records

Positive / negative co-expression edges

Single-cell

✓ 3 records

scRNA-seq datasets, cell atlas and marker genes

Proteome

✓ 1 record

Mass-spectrometry proteomics samples

Epigenome

— not available

DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq

Metagenome

— not available

Host-associated metagenomic samples

Phenotype

— not available

Trait measurements with geo-referencing

Paleobiology

— not available

Fossil occurrences and stratigraphic records

Mitogenome

— not available

Mitochondrial gene annotations

Transposable elements

— not available

Repeat annotation of assembled genomes

Genome browser

✓ available

Interactive JBrowse track for the assembly

Assembly record

Assembly nameHSymV2.1
Assembly levelChromosome
Assembled byGCA_029227915.2
Genome size458.64
Scaffolds78
Contigs368
Scaffold N5033314500
Contig N5025832406
GC content36
BUSCOC:98.4%[S:93.5%,D:4.9%],F:0.9%,M:0.7%
Protein-coding genes25,825
Proteins25,825
Chromosomes15
WGS accessionJARBIS02
BioProjectPRJNA935535
SubmitterUniversity of Vienna
Year2023
ReferenceChromosome-level genome assembly of Hydractinia symbiolongicarpus G3: Genes, Genomes, Genetics [link]

Other Hydrozoa species

Availability shown here is recomputed from the live database every hour (last built 2026-09-16 20:42). If a data type is listed as unavailable for Hydractinia symbiolongicarpus, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.

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