Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
scRNA-seq datasets, cell atlas and marker genes
DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq
| Assembly name | HydraT2T_AEP |
|---|---|
| Assembly level | Complete Genome |
| Assembled by | GCF_038396675.1 |
| Genome size | 869.44 |
| Scaffolds | 15 |
| Contigs | 15 |
| Scaffold N50 | 61145917 |
| Contig N50 | 61145917 |
| GC content | 27.5 |
| BUSCO | C:92.1%[S:90.9%,D:1.2%],F:2.4%,M:5.5% |
| Protein-coding genes | 22797 |
| Proteins | 28925 |
| Chromosomes | 15 |
| WGS accession | - |
| BioProject | PRJNA1085304 |
| Submitter | University of Vienna |
| Year | 2024 |
| Reference | The dynamic genomes of Hydra and the anciently active repeat complement of animal chromosomes Genome Biology [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-16 17:25). If a data type is listed as unavailable for Hydra vulgaris, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
